Biomni

Verified Integration

Author: @AI•Category: ServerApplication

GitHub Repository

JSON-RPC 2.0

Protocol Standard

Sub-second

Execution Latency

Active

Operational Status

Client Configuration

— Connect Biomni to Claude Desktop or Cursor in seconds

{
  "mcpServers": {
    "biomni": {
      "command": "npx",
      "args": [
        "-y",
        "@modelcontextprotocol/server-biomni"
      ],
      "env": {}
    }
  }
}

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json (macOS) or %APPDATA%\Claude\claude_desktop_config.json (Windows).

Architecture & Capabilities

System Overview

Exposes 18 bioinformatics command-line interface tools as a Databricks application for use by AI agents.

Indexed Date

7/22/2026

License

Open Source

Protocol Layer

stdio / SSE RPC

Frequently Asked Questions

Architecture and operational details for Biomni

Biomni is a Databricks application that exposes 18 bioinformatics command-line interface (CLI) tools via the Model Context Protocol (MCP), enabling AI agents on Databricks (like Genie Code, Claude, or custom agents) to seamlessly access complex bioinformatics functionalities.

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